Graphviz
Graphviz is open source graph visualization software. It has several main graph layout programs.
15 Alternatives To Graphviz
Code2Flow
An easy solution to create product flows.
Dia
Dia is a GTK+ based diagram creation program for GNU/Linux, MacOS X, Unix, and Windows, and is released under the GPL license.
Gephi
Gephi is an open-source software for visualizing and analyzing large networks graphs.
LucidChart
LucidChart is the missing link in online productivity suites. LucidChart allows users to create, collaborate on, and publish attractive flowcharts and other diagrams from a web browser.
Netglub
Netglub, the really open source information gathering solution.
PlantUML
PlantUML is an open-source tool that uses simple textual descriptions to draw UML diagrams.
Poortego
Open-source python project to handle the storage and linking of open-source intelligence (ala Maltego) - mgeide/poortego
StarUML
StarUML
Trumpet
Postcards to the President
UMLet
UMLet - Free UML Tool for Fast UML Diagrams
Visio
Simplify and communicate complex information using data-linked diagrams.
dradis
Dradis is the open-source reporting and collaboration tool for IT security professionals.
xfig
Xfig is a free and open source vector graphics editor which runs under the X Window System on most…
yEd Graph Editor
yEd is a free desktop application to quickly create, import, edit, and automatically arrange diagrams. It runs on Windows, Mac OS X, and Unix/Linux.