pymol
Although PyMOL is built on an open-source platform, compiling PyMOL, integrating third party tools, and learning PyMOL can be difficult. Incentive PyMOL is a packaged software product that makes it easy to become a PyMOL user.
- Automated Microsoft Installer for Windows
- Mac OS X "drag & drop"
- Access to e-mail and phone support by Schrödinger Technical Support
- Incentive documentation that comprehensively covers PyMOL features and updates
- Narrated screencasts and step-by-step tutorials
- FreeMOL, including the APBS (Adaptive Poisson-Boltzmann Solver) Plugin for PyMOL
- RigiMOL, a proprietary molecular morphing software product
- Open-source implementation of the MMFF94 (Merck Molecular Force Field)
- MPEG encoder for simplified moviemaking
- Clipboard support for copying and pasting of images in Windows and Mac
- A "one window" native user interface with a Tcl/Tk/X11 option (MacPyMOL)
- Direct export of QuickTime movies (Mac only)
- For Schrödinger Users: PyMOL for Maestro to easily export data to PyMOL
- Built-in MTZ Map Reading (and auto loading)
- Stereochemical labeling (R/S enantiomers)
- Improved atom typing (MOL2 and MacroModel)
- Improved real-time rendering quality
- Improved real-time rendering speed
- Improved 'undo' command
- Optimized anaglyph coloring
- New mouse modes for moving lights
- Ambient occlusion
- Surface color smoothing
- Improved feedback on the 'clean' command
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